Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Lire1P11260 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lire1P11260 Gm14727-201ENSMUST00000118526 525 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm14869-201ENSMUST00000119007 884 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm15493-201ENSMUST00000119461 528 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm14721-201ENSMUST00000121381 525 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm26480-201ENSMUST00000122619 297 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm2735-201ENSMUST00000136133 277 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm25505-201ENSMUST00000157220 246 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm16298-201ENSMUST00000161107 420 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm22923-201ENSMUST00000174952 110 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm9285-201ENSMUST00000177691 697 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm26729-201ENSMUST00000180744 352 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lire1P11260 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Mir6989-201ENSMUST00000184812 65 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm9114-201ENSMUST00000188558 997 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm37295-201ENSMUST00000192186 109 ntBASIC6.35□□□□□ -1.39
Lire1P11260 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.35□□□□□ -1.39
Lire1P11260 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm43546-201ENSMUST00000196721 943 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm30517-201ENSMUST00000197350 772 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm42713-201ENSMUST00000202709 945 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm45136-201ENSMUST00000205793 943 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.35□□□□□ -1.39
Lire1P11260 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.35□□□□□ -1.39
Lire1P11260 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.35□□□□□ -1.39
Lire1P11260 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Lire1P11260 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Gm5321-201ENSMUST00000072050 447 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lire1P11260 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.35□□□□□ -1.39
Lire1P11260 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.35□□□□□ -1.39
Lire1P11260 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lire1P11260 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Lire1P11260 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Lire1P11260 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Lire1P11260 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lire1P11260 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Lire1P11260 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gm22707-201ENSMUST00000103834 110 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm25379-201ENSMUST00000104338 114 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Lire1P11260 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gm11971-201ENSMUST00000117715 288 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.34□□□□□ -1.39
Lire1P11260 Gm9439-201ENSMUST00000119554 973 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Mir1900-201ENSMUST00000122714 78 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lire1P11260 Gm10913-201ENSMUST00000133732 463 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm16284-201ENSMUST00000140995 400 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm2709-201ENSMUST00000142979 350 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.34□□□□□ -1.39
Lire1P11260 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.34□□□□□ -1.39
Lire1P11260 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lire1P11260 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lire1P11260 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm36928-201ENSMUST00000192466 694 ntBASIC6.34□□□□□ -1.39
Lire1P11260 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms