Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm11462-201ENSMUST00000117749 562 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm13983-201ENSMUST00000118018 865 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm13679-201ENSMUST00000118678 484 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm12135-201ENSMUST00000119170 466 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm25640-201ENSMUST00000175378 125 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm25082-201ENSMUST00000177296 255 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC5.07□□□□□ -1.6
Hmgb3O54879 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm37380-201ENSMUST00000193752 397 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm43089-201ENSMUST00000199162 275 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hmgb3O54879 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 AC123917.1-201ENSMUST00000228063 1048 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 AC124715.1-201ENSMUST00000228480 754 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Mir711-201ENSMUST00000102188 82 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm7091-201ENSMUST00000116438 586 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm5456-201ENSMUST00000170706 844 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm17045-201ENSMUST00000178600 844 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm4308-201ENSMUST00000179735 914 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm27014-201ENSMUST00000182658 937 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm6123-201ENSMUST00000193658 1069 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm9517-201ENSMUST00000195021 874 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm44342-201ENSMUST00000196874 129 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm44383-201ENSMUST00000198940 129 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm32983-201ENSMUST00000208500 505 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm6667-201ENSMUST00000217169 564 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm17849-201ENSMUST00000219788 853 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC152940.1-201ENSMUST00000226504 139 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.06□□□□□ -1.6
Hmgb3O54879 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hmgb3O54879 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.06□□□□□ -1.6
Hmgb3O54879 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms