Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm13566-201ENSMUST00000117428 1142 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm17847-201ENSMUST00000188261 1127 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm45026-201ENSMUST00000205292 833 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gm45185-201ENSMUST00000207556 404 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 AC167222.2-201ENSMUST00000220014 295 ntBASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc180J3QNE4 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm29438-201ENSMUST00000191298 2613 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm22690-201ENSMUST00000175054 110 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm22932-201ENSMUST00000175510 72 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm25065-201ENSMUST00000177914 132 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm25891-201ENSMUST00000180050 132 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm45874-201ENSMUST00000212423 346 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 AC158537.1-201ENSMUST00000224637 1711 ntBASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc180J3QNE4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 AC154406.1-201ENSMUST00000215220 2529 ntBASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc180J3QNE4 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm13493-201ENSMUST00000120318 493 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm26923-201ENSMUST00000182615 996 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Mir6992-201ENSMUST00000183342 109 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm18628-201ENSMUST00000220584 475 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 AC211878.1-201ENSMUST00000221668 474 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm43279-201ENSMUST00000202376 2512 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm25013-201ENSMUST00000158402 128 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm34149-201ENSMUST00000203547 304 ntBASIC11.49□□□□□ -0.57
Ccdc180J3QNE4 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms