Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm14116-201ENSMUST00000117733 805 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm14755-201ENSMUST00000118037 384 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm14870-201ENSMUST00000118414 156 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm12929-201ENSMUST00000122406 370 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm28023-201ENSMUST00000184556 60 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm27825-201ENSMUST00000184586 60 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm43576-201ENSMUST00000197937 871 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm43867-201ENSMUST00000203860 525 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm45626-201ENSMUST00000210093 361 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm23979-201ENSMUST00000104071 128 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm23768-201ENSMUST00000104440 131 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm12677-201ENSMUST00000118668 426 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm6654-201ENSMUST00000118950 348 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm13357-201ENSMUST00000120528 537 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm11370-201ENSMUST00000120583 260 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm11498-201ENSMUST00000120660 949 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm15750-201ENSMUST00000120970 616 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm14038-201ENSMUST00000121500 807 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm13642-201ENSMUST00000121697 381 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm22820-201ENSMUST00000157205 329 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm24155-201ENSMUST00000175259 110 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm18849-201ENSMUST00000189861 560 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm2229-201ENSMUST00000193328 710 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm29784-201ENSMUST00000196217 406 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm42708-201ENSMUST00000196332 905 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm32983-201ENSMUST00000208500 505 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Gm8607-201ENSMUST00000221864 431 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim3Q9R1R2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms