Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm42464-202ENSMUST00000198111 774 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm44265-201ENSMUST00000203631 465 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm45156-201ENSMUST00000207255 439 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm14614-201ENSMUST00000119873 384 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm23756-201ENSMUST00000157582 114 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm24359-201ENSMUST00000158418 221 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm26509-201ENSMUST00000180947 948 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm8609-201ENSMUST00000182967 998 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm27299-201ENSMUST00000184593 103 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm17895-201ENSMUST00000194028 874 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm43396-201ENSMUST00000197506 706 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm43867-201ENSMUST00000203860 525 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm9367-201ENSMUST00000205703 546 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm32983-201ENSMUST00000208500 505 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm24036-201ENSMUST00000082868 156 ntBASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lima1Q9ERG0 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Naip3-201ENSMUST00000118082 4208 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lima1Q9ERG0 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms