Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm26422-201ENSMUST00000104276 132 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm2178-201ENSMUST00000104927 357 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm12040-201ENSMUST00000118357 537 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm12115-201ENSMUST00000119969 447 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm11553-201ENSMUST00000120682 240 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm11689-201ENSMUST00000120766 302 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm15349-201ENSMUST00000121154 204 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm15586-201ENSMUST00000121218 528 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm15187-201ENSMUST00000122329 264 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm3810-201ENSMUST00000122413 476 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm24157-201ENSMUST00000175265 111 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm28149-201ENSMUST00000187102 378 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm28768-201ENSMUST00000189034 378 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm37376-201ENSMUST00000192176 453 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm37620-201ENSMUST00000192910 501 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm5853-201ENSMUST00000197183 632 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm4585-201ENSMUST00000207218 452 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm5324-201ENSMUST00000208115 476 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm9652-201ENSMUST00000209345 163 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm18040-201ENSMUST00000217922 827 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm18601-201ENSMUST00000220831 634 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Use1Q9CQ56 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Use1Q9CQ56 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm14356-201ENSMUST00000118322 869 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm12677-201ENSMUST00000118668 426 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm12583-201ENSMUST00000120677 853 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm11925-201ENSMUST00000121375 535 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm14353-201ENSMUST00000122200 869 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm8648-201ENSMUST00000122457 221 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm36991-201ENSMUST00000191800 648 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm37477-201ENSMUST00000195215 884 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm44112-201ENSMUST00000204787 372 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm20136-201ENSMUST00000207501 891 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm4548-201ENSMUST00000208487 509 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Use1Q9CQ56 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.97□□□□□ -1.45
Use1Q9CQ56 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.97□□□□□ -1.45
Use1Q9CQ56 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms