Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm7494-201ENSMUST00000121248 441 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm5392-201ENSMUST00000122189 789 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm25435-201ENSMUST00000158277 267 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm8550-201ENSMUST00000161621 653 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm27299-201ENSMUST00000184593 103 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm43867-201ENSMUST00000203860 525 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm45626-201ENSMUST00000210093 361 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm8607-201ENSMUST00000221864 431 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm6575-201ENSMUST00000222946 697 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm25099-201ENSMUST00000093716 116 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh4Q99MT2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm23979-201ENSMUST00000104071 128 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm12713-201ENSMUST00000118404 764 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm12447-201ENSMUST00000119110 470 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm7350-201ENSMUST00000120964 636 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm13440-201ENSMUST00000121665 496 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm14363-201ENSMUST00000122304 409 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm26023-201ENSMUST00000122722 313 ntBASIC6.32□□□□□ -1.4
Msh4Q99MT2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh4Q99MT2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms