Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm11504-201ENSMUST00000120211 173 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm23467-201ENSMUST00000157127 159 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm25246-201ENSMUST00000175476 69 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm6055-201ENSMUST00000180532 378 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm26570-201ENSMUST00000180672 342 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm9274-201ENSMUST00000182505 984 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Mir7020-201ENSMUST00000183787 70 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm42720-201ENSMUST00000196813 300 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm5324-201ENSMUST00000208115 476 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm18039-201ENSMUST00000217816 728 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm10221-201ENSMUST00000088299 309 ntBASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RtcbQ99LF4 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm14712-201ENSMUST00000120195 772 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Mir7653-201ENSMUST00000184358 61 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm21742-201ENSMUST00000189352 548 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm43383-201ENSMUST00000195981 469 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm43501-201ENSMUST00000202513 107 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Gm44253-201ENSMUST00000203387 628 ntBASIC8.49□□□□□ -1.05
RtcbQ99LF4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RtcbQ99LF4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms