Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm22604-201ENSMUST00000157604 311 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm7867-201ENSMUST00000189856 546 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm44411-201ENSMUST00000204172 349 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm18012-201ENSMUST00000204558 773 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 AC122539.1-201ENSMUST00000219925 329 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Mir3068-201ENSMUST00000083004 136 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm5446-201ENSMUST00000091762 784 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm22256-201ENSMUST00000102291 107 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm14733-201ENSMUST00000117680 133 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm11920-201ENSMUST00000118491 563 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm15786-201ENSMUST00000121079 450 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm25395-201ENSMUST00000157343 272 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm25487-201ENSMUST00000158725 125 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm7393-201ENSMUST00000172650 739 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm22990-201ENSMUST00000175427 89 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm4845-201ENSMUST00000179202 562 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm28006-201ENSMUST00000183841 122 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm4796-201ENSMUST00000219802 624 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 AC116502.1-201ENSMUST00000220989 291 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 AC153152.2-201ENSMUST00000223165 959 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Mir106b-201ENSMUST00000083580 82 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.04□□□□□ -1.6
Nup35Q8R4R6 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nup35Q8R4R6 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Nup35Q8R4R6 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms