Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.71□□□□□ -1.17
Brf1Q8CFK2 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Brf1Q8CFK2 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Brf1Q8CFK2 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Brf1Q8CFK2 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Brf1Q8CFK2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Brf1Q8CFK2 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm22103-201ENSMUST00000116733 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm26475-201ENSMUST00000116769 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm23620-201ENSMUST00000116812 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm25042-201ENSMUST00000116856 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm25540-201ENSMUST00000116880 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm12939-201ENSMUST00000117303 165 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm15181-201ENSMUST00000120142 177 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm15164-201ENSMUST00000122203 271 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm23343-201ENSMUST00000158964 143 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm22548-201ENSMUST00000174899 78 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm23550-201ENSMUST00000179003 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm25123-201ENSMUST00000179154 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm25353-201ENSMUST00000179366 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm22992-201ENSMUST00000179496 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm25892-201ENSMUST00000179867 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm24092-201ENSMUST00000180257 121 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm37770-201ENSMUST00000192855 772 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm37511-201ENSMUST00000192901 294 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm44387-201ENSMUST00000196298 145 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm44163-201ENSMUST00000205140 475 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm18899-201ENSMUST00000217663 546 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 BC055308-201ENSMUST00000193380 2538 ntBASIC7.71□□□□□ -1.18
Brf1Q8CFK2 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Brf1Q8CFK2 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm15016-201ENSMUST00000117300 720 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm8250-201ENSMUST00000117398 774 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm14356-201ENSMUST00000118322 869 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm12040-201ENSMUST00000118357 537 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm2986-201ENSMUST00000121603 382 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mir1953-201ENSMUST00000157866 89 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm25487-201ENSMUST00000158725 125 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm11107-201ENSMUST00000165414 505 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm5334-201ENSMUST00000187472 720 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm18805-201ENSMUST00000206872 655 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm45696-201ENSMUST00000212088 985 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms