Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.28□□□□□ -1.4
Lrif1Q8CDD9 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.28□□□□□ -1.4
Lrif1Q8CDD9 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Lrif1Q8CDD9 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Lrif1Q8CDD9 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm25093-201ENSMUST00000103993 132 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm12573-201ENSMUST00000118158 286 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm7113-201ENSMUST00000120477 958 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm24682-201ENSMUST00000158764 137 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm4202-201ENSMUST00000169025 733 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm22990-201ENSMUST00000175427 89 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm35323-201ENSMUST00000191836 499 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm44411-201ENSMUST00000204172 349 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm46203-201ENSMUST00000218130 478 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm35619-201ENSMUST00000222548 600 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.27□□□□□ -1.41
Lrif1Q8CDD9 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm26167-201ENSMUST00000158423 253 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm22523-201ENSMUST00000158696 100 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm16298-201ENSMUST00000161107 420 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm43141-201ENSMUST00000199695 274 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm7463-201ENSMUST00000201541 547 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm44856-201ENSMUST00000206639 304 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm45156-201ENSMUST00000207255 439 ntBASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.26□□□□□ -1.41
Lrif1Q8CDD9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms