Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trub1Q8C0D0 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.46□□□□□ -1.37
Trub1Q8C0D0 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.46□□□□□ -1.37
Trub1Q8C0D0 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.46□□□□□ -1.37
Trub1Q8C0D0 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.46□□□□□ -1.37
Trub1Q8C0D0 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm26289-201ENSMUST00000104169 131 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm25415-201ENSMUST00000104220 132 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm13193-201ENSMUST00000117275 225 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm7058-201ENSMUST00000119209 902 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm11472-201ENSMUST00000121305 556 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm12399-201ENSMUST00000121475 446 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm26162-201ENSMUST00000157793 132 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm25989-201ENSMUST00000158761 133 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm8860-201ENSMUST00000193160 445 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm45473-201ENSMUST00000211452 616 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm18103-201ENSMUST00000216621 779 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trub1Q8C0D0 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm13818-201ENSMUST00000119441 511 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm12504-202ENSMUST00000148026 306 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm23954-201ENSMUST00000157213 353 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Gm20549-201ENSMUST00000174804 429 ntBASIC6.45□□□□□ -1.38
Trub1Q8C0D0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms