Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm23553-201ENSMUST00000157817 295 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm37072-201ENSMUST00000194570 837 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm44360-201ENSMUST00000200081 82 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm44837-201ENSMUST00000206863 717 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm10688-201ENSMUST00000214985 520 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 AC164107.1-202ENSMUST00000228953 1816 ntBASIC8.87□□□□□ -0.99
Usp47Q8BY87 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp47Q8BY87 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm8863-201ENSMUST00000216630 926 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm10764-202ENSMUST00000220397 2335 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm23440-201ENSMUST00000104299 130 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm13870-201ENSMUST00000117214 1023 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm14529-201ENSMUST00000117894 406 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm25065-201ENSMUST00000177914 132 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm25891-201ENSMUST00000180050 132 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm17934-201ENSMUST00000192818 422 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm18592-201ENSMUST00000221529 276 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Gm2614-201ENSMUST00000223227 403 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 AC154527.1-201ENSMUST00000225809 242 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Olfr519-201ENSMUST00000084752 960 ntBASIC8.86□□□□□ -0.99
Usp47Q8BY87 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp47Q8BY87 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Ap5m1-208ENSMUST00000228238 3514 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 AC154841.1-201ENSMUST00000227263 1479 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms