Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm25795-201ENSMUST00000104421 132 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm15901-201ENSMUST00000117663 941 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm14000-201ENSMUST00000118670 233 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm4789-201ENSMUST00000121708 1216 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm11545-201ENSMUST00000146507 375 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm24179-201ENSMUST00000158925 127 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm4540-201ENSMUST00000170669 429 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm25065-201ENSMUST00000177914 132 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm25891-201ENSMUST00000180050 132 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm27039-201ENSMUST00000182438 962 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm29519-201ENSMUST00000186994 398 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm8241-201ENSMUST00000189286 816 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm8480-201ENSMUST00000190350 698 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm8009-201ENSMUST00000191672 436 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm6119-201ENSMUST00000193443 1206 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm9788-201ENSMUST00000057038 906 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm45885-202ENSMUST00000211520 1383 ntBASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp40Q8BWR4 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm42507-201ENSMUST00000201187 2555 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm12400-201ENSMUST00000120915 1003 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm7350-201ENSMUST00000120964 636 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm42452-201ENSMUST00000199749 617 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm45473-201ENSMUST00000211452 616 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC131654.1-201ENSMUST00000219675 745 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 AC154527.3-201ENSMUST00000225519 989 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm5341-201ENSMUST00000058881 489 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm10221-201ENSMUST00000088299 309 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp40Q8BWR4 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms