Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm24989-201ENSMUST00000104461 88 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm26144-201ENSMUST00000104475 132 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm14116-201ENSMUST00000117733 805 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm16511-201ENSMUST00000120019 564 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm11504-201ENSMUST00000120211 173 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm26037-201ENSMUST00000158150 311 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm28023-201ENSMUST00000184556 60 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm27825-201ENSMUST00000184586 60 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm17895-201ENSMUST00000194028 874 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm43033-201ENSMUST00000199682 425 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Trafd1Q3UDK1 Pramel-201ENSMUST00000118979 1383 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm11472-201ENSMUST00000121305 556 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm13642-201ENSMUST00000121697 381 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Mir7669-201ENSMUST00000183442 58 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Mir6244-201ENSMUST00000184156 117 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm29663-201ENSMUST00000186962 853 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm37770-201ENSMUST00000192855 772 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm37439-201ENSMUST00000193150 856 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm5853-201ENSMUST00000197183 632 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trafd1Q3UDK1 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms