Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm7134-201ENSMUST00000122296 2406 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 AC122426.1-201ENSMUST00000214736 2235 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm22267-201ENSMUST00000104008 131 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm23979-201ENSMUST00000104071 128 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm15125-201ENSMUST00000116185 800 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm4596-201ENSMUST00000117197 442 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm15578-201ENSMUST00000117320 475 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm12573-201ENSMUST00000118158 286 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm11420-201ENSMUST00000120047 402 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm12518-201ENSMUST00000122075 779 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm23426-201ENSMUST00000122483 318 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm26505-201ENSMUST00000176208 166 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21756-201ENSMUST00000178380 930 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21405-201ENSMUST00000179024 930 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Mir7235-201ENSMUST00000183796 56 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm27186-201ENSMUST00000184223 307 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Mir8097-201ENSMUST00000185150 119 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29299-201ENSMUST00000185609 923 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21191-201ENSMUST00000186484 930 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms