Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm14382-201ENSMUST00000117374 437 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm2199-201ENSMUST00000119065 874 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm8089-201ENSMUST00000122463 968 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.36□□□□□ -1.55
Ufd1P70362 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.36□□□□□ -1.55
Ufd1P70362 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC5.36□□□□□ -1.55
Ufd1P70362 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm9064-201ENSMUST00000163579 566 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm17022-201ENSMUST00000166415 922 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm18833-201ENSMUST00000173218 862 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ufd1P70362 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm26587-201ENSMUST00000180795 989 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.36□□□□□ -1.55
Ufd1P70362 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm35619-201ENSMUST00000222548 600 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 AC154506.2-201ENSMUST00000225481 1276 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 AC139209.2-201ENSMUST00000227680 1208 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ufd1P70362 Mir296-201ENSMUST00000083587 79 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.36□□□□□ -1.55
Ufd1P70362 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ufd1P70362 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ufd1P70362 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.35□□□□□ -1.55
Ufd1P70362 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ufd1P70362 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ufd1P70362 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm23484-201ENSMUST00000104178 131 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm14356-201ENSMUST00000118322 869 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm12123-201ENSMUST00000120348 472 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm14515-201ENSMUST00000121327 216 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm14353-201ENSMUST00000122200 869 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm4997-201ENSMUST00000154056 360 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.35□□□□□ -1.55
Ufd1P70362 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm23071-201ENSMUST00000158242 115 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm24176-201ENSMUST00000158928 121 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm27684-201ENSMUST00000183778 80 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Txn-ps1-201ENSMUST00000186385 309 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm21139-201ENSMUST00000186594 877 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm28186-201ENSMUST00000187447 679 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm29369-201ENSMUST00000190674 615 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm8009-201ENSMUST00000191672 436 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm38373-201ENSMUST00000192042 288 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm37477-201ENSMUST00000195215 884 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC5.35□□□□□ -1.55
Ufd1P70362 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.35□□□□□ -1.55
Ufd1P70362 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms