Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdh11P55288 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdh11P55288 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Cdh11P55288 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm22284-201ENSMUST00000104132 132 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm12842-201ENSMUST00000117298 476 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm15216-201ENSMUST00000118058 277 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm12447-201ENSMUST00000119110 470 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm14485-201ENSMUST00000119489 493 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm15311-201ENSMUST00000119682 282 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm15305-201ENSMUST00000120354 288 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm8722-201ENSMUST00000121466 769 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm15187-201ENSMUST00000122329 264 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm8089-201ENSMUST00000122463 968 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm22223-201ENSMUST00000157360 125 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm20454-201ENSMUST00000172713 221 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm26381-201ENSMUST00000174895 92 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm21392-201ENSMUST00000182950 972 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm5334-201ENSMUST00000187472 720 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm21301-201ENSMUST00000189476 699 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.84□□□□□ -1.47
Cdh11P55288 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm43459-201ENSMUST00000202093 331 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm45070-201ENSMUST00000208100 246 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm17997-201ENSMUST00000211801 840 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdh11P55288 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdh11P55288 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdh11P55288 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.84□□□□□ -1.47
Cdh11P55288 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdh11P55288 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdh11P55288 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdh11P55288 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.84□□□□□ -1.48
Cdh11P55288 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.84□□□□□ -1.48
Cdh11P55288 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.84□□□□□ -1.48
Cdh11P55288 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cdh11P55288 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cdh11P55288 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Cdh11P55288 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdh11P55288 Pramel-201ENSMUST00000118979 1383 ntBASIC5.83□□□□□ -1.48
Cdh11P55288 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdh11P55288 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms