Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.13□□□□□ -1.43
Cdx2P43241 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdx2P43241 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm25515-201ENSMUST00000083858 157 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Cdx2P43241 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Mir700-201ENSMUST00000102169 79 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Cdx2P43241 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cdx2P43241 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdx2P43241 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm6061-201ENSMUST00000175860 492 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm19560-201ENSMUST00000177510 514 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm37203-201ENSMUST00000191618 385 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm8860-201ENSMUST00000193160 445 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdx2P43241 Mir6906-201ENSMUST00000198998 58 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm45473-201ENSMUST00000211452 616 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Gm7802-201ENSMUST00000216464 262 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx2P43241 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx2P43241 Gm26163-201ENSMUST00000083792 178 ntBASIC6.12□□□□□ -1.43
Cdx2P43241 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx2P43241 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Cdx2P43241 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.11□□□□□ -1.43
Cdx2P43241 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx2P43241 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx2P43241 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms