Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
P20040 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
P20040 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.65□□□□□ -1.51
P20040 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.65□□□□□ -1.51
P20040 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.65□□□□□ -1.51
P20040 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P20040 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.65□□□□□ -1.51
P20040 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.65□□□□□ -1.51
P20040 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
P20040 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.65□□□□□ -1.51
P20040 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.64□□□□□ -1.51
P20040 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.64□□□□□ -1.51
P20040 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.64□□□□□ -1.51
P20040 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.64□□□□□ -1.51
P20040 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.64□□□□□ -1.51
P20040 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
P20040 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
P20040 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Gm12874-201ENSMUST00000117190 913 ntBASIC5.64□□□□□ -1.51
P20040 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.64□□□□□ -1.51
P20040 Gm11545-201ENSMUST00000146507 375 ntBASIC5.64□□□□□ -1.51
P20040 Gm24155-201ENSMUST00000175259 110 ntBASIC5.64□□□□□ -1.51
P20040 Mir5617-201ENSMUST00000176786 57 ntBASIC5.64□□□□□ -1.51
P20040 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Gm26595-201ENSMUST00000181585 484 ntBASIC5.64□□□□□ -1.51
P20040 Gm38068-201ENSMUST00000192546 540 ntBASIC5.64□□□□□ -1.51
P20040 Gm7804-202ENSMUST00000194187 854 ntBASIC5.64□□□□□ -1.51
P20040 Gm8454-201ENSMUST00000196980 811 ntBASIC5.64□□□□□ -1.51
P20040 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.64□□□□□ -1.51
P20040 Gm17834-201ENSMUST00000204322 891 ntBASIC5.64□□□□□ -1.51
P20040 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.64□□□□□ -1.51
P20040 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
P20040 Gm7780-201ENSMUST00000214787 406 ntBASIC5.64□□□□□ -1.51
P20040 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.64□□□□□ -1.51
P20040 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Gm18628-201ENSMUST00000220584 475 ntBASIC5.64□□□□□ -1.51
P20040 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.64□□□□□ -1.51
P20040 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.64□□□□□ -1.51
P20040 Gm19154-201ENSMUST00000223330 940 ntBASIC5.64□□□□□ -1.51
P20040 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.64□□□□□ -1.51
P20040 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.64□□□□□ -1.51
P20040 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
P20040 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Gm29486-201ENSMUST00000088648 372 ntBASIC5.64□□□□□ -1.51
P20040 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
P20040 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
P20040 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.64□□□□□ -1.51
P20040 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
P20040 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.64□□□□□ -1.51
P20040 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P20040 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.64□□□□□ -1.51
P20040 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.64□□□□□ -1.51
P20040 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
P20040 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
P20040 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.63□□□□□ -1.51
P20040 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.63□□□□□ -1.51
P20040 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.63□□□□□ -1.51
P20040 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P20040 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
P20040 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.63□□□□□ -1.51
P20040 Gm25785-201ENSMUST00000104129 125 ntBASIC5.63□□□□□ -1.51
P20040 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
P20040 Gm12653-201ENSMUST00000117778 561 ntBASIC5.63□□□□□ -1.51
P20040 Gm13265-201ENSMUST00000118090 421 ntBASIC5.63□□□□□ -1.51
P20040 Gm6654-201ENSMUST00000118950 348 ntBASIC5.63□□□□□ -1.51
P20040 Gm11370-201ENSMUST00000120583 260 ntBASIC5.63□□□□□ -1.51
P20040 Gm14300-201ENSMUST00000120800 946 ntBASIC5.63□□□□□ -1.51
P20040 Gm12929-201ENSMUST00000122406 370 ntBASIC5.63□□□□□ -1.51
P20040 Gm8648-201ENSMUST00000122457 221 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms