Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm8312-201ENSMUST00000119380 618 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm15502-201ENSMUST00000121449 208 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm2986-201ENSMUST00000121603 382 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm25057-201ENSMUST00000157366 88 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm25487-201ENSMUST00000158725 125 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm26509-201ENSMUST00000180947 948 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm43850-201ENSMUST00000202021 578 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm43928-201ENSMUST00000203737 409 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm24695-201ENSMUST00000083877 83 ntBASIC6.9□□□□□ -1.3
Chmp6P0C0A3 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.9□□□□□ -1.31
Chmp6P0C0A3 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm24173-201ENSMUST00000104130 128 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm9506-201ENSMUST00000118516 320 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm13183-201ENSMUST00000118615 789 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm14900-201ENSMUST00000120304 733 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm15596-201ENSMUST00000121139 784 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm22223-201ENSMUST00000157360 125 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm26486-201ENSMUST00000158021 110 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm24300-201ENSMUST00000177809 109 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm24017-201ENSMUST00000178726 109 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm23952-201ENSMUST00000179380 109 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm44361-201ENSMUST00000197960 94 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm7554-201ENSMUST00000202282 574 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm45070-201ENSMUST00000208100 246 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm7413-201ENSMUST00000219498 462 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm5341-201ENSMUST00000058881 489 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm6436-201ENSMUST00000077163 451 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm28392-201ENSMUST00000077630 393 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms