Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm9357-201ENSMUST00000207138 805 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm45100-201ENSMUST00000209153 391 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm4042-201ENSMUST00000216946 637 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm18503-201ENSMUST00000220340 728 ntBASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hmgb3O54879 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hmgb3O54879 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Hmgb3O54879 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Hmgb3O54879 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.09□□□□□ -1.6
Hmgb3O54879 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.09□□□□□ -1.6
Hmgb3O54879 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Hmgb3O54879 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm5605-201ENSMUST00000208940 1305 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm26419-201ENSMUST00000104272 133 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Zfp389-201ENSMUST00000118425 675 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm15149-201ENSMUST00000119370 360 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm4997-201ENSMUST00000154056 360 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm7707-201ENSMUST00000165950 1156 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm26509-201ENSMUST00000180947 948 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Mir6241-201ENSMUST00000184225 103 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm18838-201ENSMUST00000204855 886 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm45156-201ENSMUST00000207255 439 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm2975-201ENSMUST00000209710 820 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm9604-201ENSMUST00000211175 433 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm2996-201ENSMUST00000211398 537 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm45756-201ENSMUST00000212491 407 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 AC160338.3-201ENSMUST00000214836 384 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm11360-201ENSMUST00000221898 262 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hmgb3O54879 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hmgb3O54879 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.08□□□□□ -1.6
Hmgb3O54879 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hmgb3O54879 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Hmgb3O54879 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hmgb3O54879 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.07□□□□□ -1.6
Hmgb3O54879 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.07□□□□□ -1.6
Hmgb3O54879 Mir503-201ENSMUST00000102168 71 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms