Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Srp54bE9PXC0 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Snora35-201ENSMUST00000104579 128 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm13772-201ENSMUST00000118431 317 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm13455-201ENSMUST00000118767 517 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm7212-201ENSMUST00000120817 348 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm14796-201ENSMUST00000121216 959 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm4660-201ENSMUST00000131499 403 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mir1960-201ENSMUST00000157488 78 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm24435-201ENSMUST00000157886 110 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm21728-201ENSMUST00000188442 695 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm21889-201ENSMUST00000188487 695 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20932-201ENSMUST00000189115 694 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm21920-201ENSMUST00000190042 695 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm9517-201ENSMUST00000195021 874 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm18591-201ENSMUST00000220568 763 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm26226-201ENSMUST00000082509 116 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.42□□□□□ -1.38
Srp54bE9PXC0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Srp54bE9PXC0 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm11902-201ENSMUST00000118849 270 ntBASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.41□□□□□ -1.38
Srp54bE9PXC0 Gm14485-201ENSMUST00000119489 493 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms