Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm29189-201ENSMUST00000188018 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29476-201ENSMUST00000188397 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29505-201ENSMUST00000188424 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28125-201ENSMUST00000188470 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29391-201ENSMUST00000188545 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29280-201ENSMUST00000188571 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28349-201ENSMUST00000188590 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29652-201ENSMUST00000188622 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28819-206ENSMUST00000188816 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29079-201ENSMUST00000188875 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28213-201ENSMUST00000189183 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29382-201ENSMUST00000189549 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29377-205ENSMUST00000189603 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28327-201ENSMUST00000189638 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28790-201ENSMUST00000189642 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28907-201ENSMUST00000189700 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29586-207ENSMUST00000189745 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29115-201ENSMUST00000189870 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28366-201ENSMUST00000190147 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29212-201ENSMUST00000190384 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29533-201ENSMUST00000190403 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28162-201ENSMUST00000190545 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29030-201ENSMUST00000190848 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28742-201ENSMUST00000191001 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28899-201ENSMUST00000191161 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29567-201ENSMUST00000191188 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28222-201ENSMUST00000191210 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28776-201ENSMUST00000191282 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29306-201ENSMUST00000191366 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29618-201ENSMUST00000191423 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28136-210ENSMUST00000191432 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm29251-201ENSMUST00000191480 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm28658-201ENSMUST00000191532 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm32180-201ENSMUST00000192415 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm30598-201ENSMUST00000192620 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm37627-201ENSMUST00000194585 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm34274-201ENSMUST00000195825 615 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm2287-201ENSMUST00000197417 1084 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm4525-201ENSMUST00000198831 254 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm4410-201ENSMUST00000199349 686 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm2975-201ENSMUST00000209710 820 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm7780-201ENSMUST00000214787 406 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC164629.1-201ENSMUST00000220250 1113 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 AC134335.1-201ENSMUST00000227626 329 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm25189-201ENSMUST00000083911 164 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H2afb3S4R1G7 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.9□□□□□ -1.46
H2afb3S4R1G7 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm25760-201ENSMUST00000103989 132 ntBASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.9□□□□□ -1.46
H2afb3S4R1G7 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms