Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm15216-201ENSMUST00000118058 277 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm7113-201ENSMUST00000120477 958 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm12229-201ENSMUST00000120487 468 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm25962-201ENSMUST00000157173 168 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm20454-201ENSMUST00000172713 221 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm20432-201ENSMUST00000173716 250 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm26381-201ENSMUST00000174895 92 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm7804-202ENSMUST00000194187 854 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm8190-201ENSMUST00000199603 586 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm7351-201ENSMUST00000210745 580 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm18591-201ENSMUST00000220568 763 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm33312-201ENSMUST00000222443 332 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim3Q9R1R2 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm25785-201ENSMUST00000104129 125 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm24790-201ENSMUST00000104285 132 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm10936-201ENSMUST00000105264 252 ntBASIC6.05□□□□□ -1.44
Trim3Q9R1R2 Gm12939-201ENSMUST00000117303 165 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms