Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm11392-201ENSMUST00000181419 710 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Pea15b-201ENSMUST00000182806 387 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm36928-201ENSMUST00000192466 694 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Ighv1-41-201ENSMUST00000194414 329 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm37325-201ENSMUST00000194971 694 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm42461-201ENSMUST00000198627 1150 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm31230-201ENSMUST00000199725 785 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm5723-201ENSMUST00000203096 432 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm29848-201ENSMUST00000203107 295 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm18226-201ENSMUST00000215261 521 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm29809-201ENSMUST00000218423 493 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 AC167977.1-201ENSMUST00000221384 234 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 AV026068-229ENSMUST00000225516 595 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm25810-201ENSMUST00000082752 108 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.83□□□□□ -1
Ube3bQ9ES34 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC8.83□□□□□ -1
Ube3bQ9ES34 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ube3bQ9ES34 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ube3bQ9ES34 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 AC120153.1-201ENSMUST00000226502 1311 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 AC127371.2-201ENSMUST00000228108 1933 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm43665-201ENSMUST00000198672 1659 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm14712-201ENSMUST00000120195 772 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm14489-201ENSMUST00000120868 901 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm11254-201ENSMUST00000122368 653 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm13602-201ENSMUST00000122405 493 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm25553-201ENSMUST00000158076 79 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm24734-201ENSMUST00000158860 262 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm23139-201ENSMUST00000179454 132 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm5272-201ENSMUST00000182730 982 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm35108-201ENSMUST00000194321 699 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm33191-201ENSMUST00000195604 699 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm5305-201ENSMUST00000204010 746 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm45432-201ENSMUST00000210391 416 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 AC153971.2-201ENSMUST00000214553 777 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Mir16-2-201ENSMUST00000083672 95 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Ube3bQ9ES34 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ube3bQ9ES34 AC169985.1-201ENSMUST00000223648 2439 ntBASIC8.82□□□□□ -1
Ube3bQ9ES34 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms