Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm25617-201ENSMUST00000179548 133 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm43383-201ENSMUST00000195981 469 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm25617-202ENSMUST00000198387 132 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm23054-201ENSMUST00000082804 162 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm12573-201ENSMUST00000118158 286 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm4992-201ENSMUST00000120256 768 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm13642-201ENSMUST00000121697 381 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm23071-201ENSMUST00000158242 115 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm7289-201ENSMUST00000168993 734 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm3242-201ENSMUST00000171273 485 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm18833-201ENSMUST00000173218 862 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm27295-201ENSMUST00000184264 153 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm4860-201ENSMUST00000200368 454 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm44253-201ENSMUST00000203387 628 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm44896-201ENSMUST00000206190 772 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm18040-201ENSMUST00000217922 827 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm31711-201ENSMUST00000220687 196 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm6575-201ENSMUST00000222946 697 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lima1Q9ERG0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm26146-201ENSMUST00000104478 185 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm14356-201ENSMUST00000118322 869 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm13357-201ENSMUST00000120528 537 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm16330-201ENSMUST00000128324 297 ntBASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.19□□□□□ -1.42
Lima1Q9ERG0 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms