Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm15316-201ENSMUST00000121082 421 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm24680-201ENSMUST00000158759 126 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm22533-201ENSMUST00000158821 274 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm2539-203ENSMUST00000181352 746 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm29072-201ENSMUST00000191149 678 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm17822-201ENSMUST00000204307 351 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm12442-201ENSMUST00000118372 338 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm22523-201ENSMUST00000158696 100 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm6489-201ENSMUST00000178167 696 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm27360-201ENSMUST00000183487 80 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm37716-201ENSMUST00000193553 947 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9652-201ENSMUST00000209345 163 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm25799-201ENSMUST00000082643 107 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms