Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm14375-201ENSMUST00000119490 855 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm12101-201ENSMUST00000121590 390 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm25117-201ENSMUST00000157194 144 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm3140-201ENSMUST00000163523 481 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21392-201ENSMUST00000182950 972 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm5260-201ENSMUST00000186157 949 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21728-201ENSMUST00000188442 695 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21889-201ENSMUST00000188487 695 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20932-201ENSMUST00000189115 694 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm21920-201ENSMUST00000190042 695 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm29784-201ENSMUST00000196217 406 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm8190-201ENSMUST00000199603 586 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm2926-201ENSMUST00000205625 239 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm45514-201ENSMUST00000211531 689 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm5321-201ENSMUST00000072050 447 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Smc1aQ9CU62 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm14659-201ENSMUST00000117667 843 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm5793-201ENSMUST00000119393 630 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm25574-201ENSMUST00000175245 249 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm43390-201ENSMUST00000196614 421 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm44253-201ENSMUST00000203387 628 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm38574-201ENSMUST00000211855 640 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Smc1aQ9CU62 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms