Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm21758-201ENSMUST00000179336 819 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm29647-201ENSMUST00000188795 666 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm28504-201ENSMUST00000190977 666 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm31511-201ENSMUST00000193134 657 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm35843-201ENSMUST00000193716 666 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm22149-202ENSMUST00000196259 137 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm42580-201ENSMUST00000197223 753 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm19104-201ENSMUST00000198392 679 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm43382-201ENSMUST00000198954 838 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm4410-201ENSMUST00000199349 686 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm42850-201ENSMUST00000202094 201 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm44726-201ENSMUST00000203427 217 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm5317-201ENSMUST00000204445 847 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm5119-201ENSMUST00000215858 634 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm18789-201ENSMUST00000216115 550 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm46312-201ENSMUST00000220961 420 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC134439.2-201ENSMUST00000221950 467 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gnrh1-202ENSMUST00000223929 428 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC117656.3-204ENSMUST00000225656 859 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 AC122937.1-201ENSMUST00000226405 793 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm20679-201ENSMUST00000177285 1402 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Snord70-201ENSMUST00000104157 87 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm14893-201ENSMUST00000117904 282 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm14727-201ENSMUST00000118526 525 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm13359-201ENSMUST00000119000 695 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm12994-201ENSMUST00000119601 447 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm14721-201ENSMUST00000121381 525 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm14411-201ENSMUST00000121798 914 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm26000-201ENSMUST00000157991 107 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm24057-201ENSMUST00000158616 302 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm29357-201ENSMUST00000186877 698 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm28573-201ENSMUST00000187821 380 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm18357-201ENSMUST00000188184 580 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm28400-201ENSMUST00000191332 380 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm28070-201ENSMUST00000191502 445 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm37979-201ENSMUST00000193065 712 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 Gm37977-201ENSMUST00000193096 721 ntBASIC8.04□□□□□ -1.12
Trim11Q99PQ2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms