Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Vps39Q8R5L3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps39Q8R5L3 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Vps39Q8R5L3 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm14733-201ENSMUST00000117680 133 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm12573-201ENSMUST00000118158 286 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm13740-201ENSMUST00000120590 310 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm6067-201ENSMUST00000121648 491 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm23756-201ENSMUST00000157582 114 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm25550-201ENSMUST00000158079 128 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm9285-201ENSMUST00000177691 697 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm25617-201ENSMUST00000179548 133 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm8502-201ENSMUST00000185708 901 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm21147-201ENSMUST00000186046 913 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm37376-201ENSMUST00000192176 453 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm5853-201ENSMUST00000197183 632 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm43157-201ENSMUST00000198223 412 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm25617-202ENSMUST00000198387 132 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm43436-201ENSMUST00000199308 147 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm7452-201ENSMUST00000200764 788 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm43459-201ENSMUST00000202093 331 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm6681-201ENSMUST00000205215 607 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm9293-201ENSMUST00000223096 306 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm6436-201ENSMUST00000077163 451 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.39□□□□□ -1.39
Vps39Q8R5L3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm25593-201ENSMUST00000102272 96 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Rnu11-201ENSMUST00000104135 134 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm24989-201ENSMUST00000104461 88 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm13469-201ENSMUST00000118231 350 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm5601-201ENSMUST00000118909 972 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm12535-201ENSMUST00000121025 484 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm12540-201ENSMUST00000121938 319 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm22276-201ENSMUST00000122469 129 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm24359-201ENSMUST00000158418 221 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm25487-201ENSMUST00000158725 125 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm8715-201ENSMUST00000162728 531 ntBASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Vps39Q8R5L3 Gm25244-201ENSMUST00000178089 132 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms