Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gm4953-201ENSMUST00000077309 483 ntBASIC5.07□□□□□ -1.6
Nup35Q8R4R6 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup35Q8R4R6 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm22103-201ENSMUST00000116733 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm26475-201ENSMUST00000116769 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm23620-201ENSMUST00000116812 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm25042-201ENSMUST00000116856 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm25540-201ENSMUST00000116880 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm15901-201ENSMUST00000117663 941 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm11501-201ENSMUST00000118039 581 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm15048-201ENSMUST00000118201 954 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm4992-201ENSMUST00000120256 768 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm12152-201ENSMUST00000122465 684 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm26182-201ENSMUST00000157688 116 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm24130-201ENSMUST00000158536 151 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm23550-201ENSMUST00000179003 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm25123-201ENSMUST00000179154 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm25353-201ENSMUST00000179366 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm22992-201ENSMUST00000179496 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm25892-201ENSMUST00000179867 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm24092-201ENSMUST00000180257 121 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm27299-201ENSMUST00000184593 103 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm36378-201ENSMUST00000201709 388 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm43867-201ENSMUST00000203860 525 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Zfp865-202ENSMUST00000076791 1129 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm6054-201ENSMUST00000078052 378 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Mir455-201ENSMUST00000093594 82 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup35Q8R4R6 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.06□□□□□ -1.6
Nup35Q8R4R6 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm15016-201ENSMUST00000117300 720 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm11553-201ENSMUST00000120682 240 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm15349-201ENSMUST00000121154 204 ntBASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.05□□□□□ -1.6
Nup35Q8R4R6 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms