Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28899-201ENSMUST00000191161 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm29567-201ENSMUST00000191188 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm28222-201ENSMUST00000191210 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm28776-201ENSMUST00000191282 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm29306-201ENSMUST00000191366 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm29618-201ENSMUST00000191423 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm28136-210ENSMUST00000191432 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm29251-201ENSMUST00000191480 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm28658-201ENSMUST00000191532 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm32180-201ENSMUST00000192415 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm30598-201ENSMUST00000192620 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm37627-201ENSMUST00000194585 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm38360-201ENSMUST00000195130 454 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm34274-201ENSMUST00000195825 615 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm43390-201ENSMUST00000196614 421 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm5723-201ENSMUST00000203096 432 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm44128-201ENSMUST00000204909 219 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm45008-201ENSMUST00000206420 493 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm9357-201ENSMUST00000207138 805 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm2975-201ENSMUST00000209710 820 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm45343-201ENSMUST00000210452 828 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.43□□□□□ -1.38
Clrn1Q8K445 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clrn1Q8K445 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm25313-201ENSMUST00000101817 116 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm15310-201ENSMUST00000117891 372 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm15828-201ENSMUST00000119911 522 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm26424-201ENSMUST00000122530 104 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm23387-201ENSMUST00000158586 107 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm24551-201ENSMUST00000158645 92 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm9672-201ENSMUST00000166437 425 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm20689-201ENSMUST00000176033 279 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm24754-201ENSMUST00000177997 107 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm23287-201ENSMUST00000179427 116 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm23143-201ENSMUST00000180137 116 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm8321-201ENSMUST00000181691 980 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Mir7005-201ENSMUST00000185089 69 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm38166-201ENSMUST00000191660 471 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm19185-201ENSMUST00000196365 643 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm43141-201ENSMUST00000199695 274 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm44181-201ENSMUST00000203106 483 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm44088-201ENSMUST00000204595 237 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm20948-201ENSMUST00000211091 449 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.42□□□□□ -1.38
Clrn1Q8K445 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clrn1Q8K445 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms