Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 AC154424.1-201ENSMUST00000225883 799 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Brf1Q8CFK2 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm22284-201ENSMUST00000104132 132 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm24989-201ENSMUST00000104461 88 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm8855-201ENSMUST00000118888 878 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm11472-201ENSMUST00000121305 556 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm15502-201ENSMUST00000121449 208 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm25109-201ENSMUST00000122474 114 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm14747-201ENSMUST00000149888 984 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm2619-202ENSMUST00000166777 651 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm26455-201ENSMUST00000175300 92 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Mir7212-201ENSMUST00000184098 61 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm38018-201ENSMUST00000195651 540 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.73□□□□□ -1.17
Brf1Q8CFK2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Brf1Q8CFK2 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm13176-201ENSMUST00000117910 477 ntBASIC7.72□□□□□ -1.17
Brf1Q8CFK2 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Brf1Q8CFK2 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms