Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm46364-201ENSMUST00000218548 319 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm4234-201ENSMUST00000119747 714 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm6142-201ENSMUST00000120290 325 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm22604-201ENSMUST00000157604 311 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Mir1981-201ENSMUST00000157934 82 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm27853-201ENSMUST00000184176 250 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm29214-201ENSMUST00000190216 570 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm6009-201ENSMUST00000210848 280 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm9237-201ENSMUST00000221499 548 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm2754-201ENSMUST00000223383 589 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm7700-201ENSMUST00000120273 970 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm23426-201ENSMUST00000122483 318 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm23884-201ENSMUST00000122687 294 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm23553-201ENSMUST00000157817 295 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm24157-201ENSMUST00000175265 111 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm19815-201ENSMUST00000175818 335 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm26959-201ENSMUST00000182376 978 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm2229-201ENSMUST00000193328 710 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44361-201ENSMUST00000197960 94 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15732-201ENSMUST00000079794 480 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms