Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.54□□□□□ -1.2
Nup88Q8CEC0 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.54□□□□□ -1.2
Nup88Q8CEC0 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Nup88Q8CEC0 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Nup88Q8CEC0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Nup88Q8CEC0 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm24069-201ENSMUST00000104512 127 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm8250-201ENSMUST00000117398 774 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm11976-201ENSMUST00000119236 295 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm14614-201ENSMUST00000119873 384 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm12518-201ENSMUST00000122075 779 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm25057-201ENSMUST00000157366 88 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm27152-201ENSMUST00000183828 99 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm29509-201ENSMUST00000185716 321 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm44225-201ENSMUST00000203582 186 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm32983-201ENSMUST00000208500 505 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nup88Q8CEC0 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Nup88Q8CEC0 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Nup88Q8CEC0 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.52□□□□□ -1.2
Nup88Q8CEC0 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm22374-201ENSMUST00000104583 132 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm14733-201ENSMUST00000117680 133 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm14300-201ENSMUST00000120800 946 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm22820-201ENSMUST00000157205 329 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Mir6367-201ENSMUST00000183385 102 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm29072-201ENSMUST00000191149 678 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm8454-201ENSMUST00000196980 811 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm44163-201ENSMUST00000205140 475 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Gm5324-201ENSMUST00000208115 476 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup88Q8CEC0 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm11271-201ENSMUST00000116054 440 ntBASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm15765-201ENSMUST00000118407 910 ntBASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm15618-201ENSMUST00000121610 452 ntBASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.51□□□□□ -1.21
Nup88Q8CEC0 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms