Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc38Q8CDN8 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.18□□□□□ -1.26
Ccdc38Q8CDN8 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc38Q8CDN8 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc38Q8CDN8 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm15153-201ENSMUST00000119867 274 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm25116-201ENSMUST00000157191 122 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm26321-201ENSMUST00000157740 242 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm24735-201ENSMUST00000158859 118 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm18833-201ENSMUST00000173218 862 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Mir5128-201ENSMUST00000175217 84 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm23632-201ENSMUST00000175289 125 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm27299-201ENSMUST00000184593 103 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm37103-201ENSMUST00000191830 115 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm37526-201ENSMUST00000194640 619 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm44984-201ENSMUST00000207802 394 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.17□□□□□ -1.26
Ccdc38Q8CDN8 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Rnu11-201ENSMUST00000104135 134 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm26422-201ENSMUST00000104276 132 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm12937-201ENSMUST00000118333 448 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm12535-201ENSMUST00000121025 484 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm14353-201ENSMUST00000122200 869 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm17895-201ENSMUST00000194028 874 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm37270-201ENSMUST00000194277 330 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm18628-201ENSMUST00000220584 475 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc38Q8CDN8 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ccdc38Q8CDN8 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc38Q8CDN8 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms