Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Gm43383-201ENSMUST00000195981 469 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm32899-201ENSMUST00000219694 207 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Nhlrc3Q8CCH2 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm14904-201ENSMUST00000117067 335 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm12040-201ENSMUST00000118357 537 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm11726-201ENSMUST00000121028 424 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm14728-201ENSMUST00000122196 492 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm23259-201ENSMUST00000158318 303 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm28186-201ENSMUST00000187447 679 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm37376-201ENSMUST00000192176 453 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.38□□□□□ -1.55
Nhlrc3Q8CCH2 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.37□□□□□ -1.55
Nhlrc3Q8CCH2 Gm14614-201ENSMUST00000119873 384 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms