Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mir7058-201ENSMUST00000184637 75 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm37871-201ENSMUST00000194973 688 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trub1Q8C0D0 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm12442-201ENSMUST00000118372 338 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm7494-201ENSMUST00000121248 441 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Mir7685-201ENSMUST00000183555 62 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm43561-201ENSMUST00000199866 448 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm17834-201ENSMUST00000204322 891 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Mir7b-201ENSMUST00000083557 111 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.48□□□□□ -1.37
Trub1Q8C0D0 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm6654-201ENSMUST00000118950 348 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm14098-201ENSMUST00000119295 623 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm12375-201ENSMUST00000119331 921 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm15181-201ENSMUST00000120142 177 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm2986-201ENSMUST00000121603 382 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm14212-201ENSMUST00000122023 826 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm11107-201ENSMUST00000165414 505 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm43744-201ENSMUST00000196387 688 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm4548-201ENSMUST00000208487 509 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.47□□□□□ -1.37
Trub1Q8C0D0 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms