Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm43031-201ENSMUST00000198500 1887 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm22714-201ENSMUST00000116894 78 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm13114-201ENSMUST00000117605 106 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm22235-201ENSMUST00000157085 110 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm22655-201ENSMUST00000174949 96 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Mir6971-201ENSMUST00000183497 63 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm19182-201ENSMUST00000207139 577 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 AV026068-216ENSMUST00000223874 328 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 AV026068-218ENSMUST00000223980 575 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.9□□□□□ -0.98
Usp47Q8BY87 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usp47Q8BY87 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
Usp47Q8BY87 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.9□□□□□ -0.99
Usp47Q8BY87 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm37186-201ENSMUST00000195629 2861 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm14695-201ENSMUST00000121721 282 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm24687-201ENSMUST00000157758 241 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Ighv5-3-201ENSMUST00000195336 322 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm23011-202ENSMUST00000197855 275 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.89□□□□□ -0.99
Usp47Q8BY87 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp47Q8BY87 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm23739-201ENSMUST00000102295 108 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm13740-201ENSMUST00000120590 310 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm24733-201ENSMUST00000158863 253 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm38122-201ENSMUST00000192679 885 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm7570-201ENSMUST00000215246 698 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm9292-201ENSMUST00000222008 710 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.88□□□□□ -0.99
Usp47Q8BY87 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp47Q8BY87 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp47Q8BY87 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms