Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Gm7557-201ENSMUST00000221935 865 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Gm23238-201ENSMUST00000083007 164 ntBASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps54Q5SPW0 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm22374-201ENSMUST00000104583 132 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm19087-201ENSMUST00000191430 946 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm8920-201ENSMUST00000196153 924 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps54Q5SPW0 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.57□□□□□ -1.2
Vps54Q5SPW0 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm12643-201ENSMUST00000116078 374 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm12307-201ENSMUST00000120581 590 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm16016-201ENSMUST00000120831 550 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm12890-201ENSMUST00000120885 373 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm23386-201ENSMUST00000158585 144 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm18839-201ENSMUST00000204292 670 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.56□□□□□ -1.2
Vps54Q5SPW0 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Vps54Q5SPW0 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm22710-201ENSMUST00000116892 125 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm13578-201ENSMUST00000120849 590 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm15300-201ENSMUST00000122324 279 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms