Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 CT572985.1-201ENSMUST00000220599 4714 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm13811-201ENSMUST00000117800 256 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm12287-201ENSMUST00000119770 707 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm13531-201ENSMUST00000121893 543 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm16060-201ENSMUST00000153140 478 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm22596-201ENSMUST00000157601 316 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm1972-201ENSMUST00000181606 964 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm27286-201ENSMUST00000184934 179 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
Shank3Q4ACU6 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm24855-201ENSMUST00000104848 97 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm14000-201ENSMUST00000118670 233 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm24216-201ENSMUST00000158259 117 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm28061-201ENSMUST00000189085 807 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm33242-201ENSMUST00000212130 1057 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm18413-201ENSMUST00000221573 655 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm2614-201ENSMUST00000223227 403 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Shank3Q4ACU6 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm11737-201ENSMUST00000118713 468 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm22492-201ENSMUST00000157192 297 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm22636-201ENSMUST00000158142 275 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm24731-201ENSMUST00000158227 131 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Mir3080-201ENSMUST00000175010 79 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm22355-201ENSMUST00000175531 96 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm16531-201ENSMUST00000180658 967 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm18996-201ENSMUST00000214851 755 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm6049-201ENSMUST00000222369 458 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms