Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15257-201ENSMUST00000177680 883 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm15252-201ENSMUST00000177750 883 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm15256-201ENSMUST00000177793 883 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm15260-201ENSMUST00000179402 883 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm28934-201ENSMUST00000186491 346 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm36994-201ENSMUST00000192941 492 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm43945-201ENSMUST00000203595 754 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm44265-201ENSMUST00000203631 465 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm45514-201ENSMUST00000211531 689 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 AC154616.2-201ENSMUST00000227978 398 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.31□□□□□ -1.08
Smarcc1P97496 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.31□□□□□ -1.08
Smarcc1P97496 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smarcc1P97496 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm25795-201ENSMUST00000104421 132 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm5401-201ENSMUST00000122444 365 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm23030-201ENSMUST00000158004 273 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm23071-201ENSMUST00000158242 115 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm8192-201ENSMUST00000182196 958 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm27849-201ENSMUST00000183673 125 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm18183-201ENSMUST00000191024 615 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Smarcc1P97496 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm44705-201ENSMUST00000206719 339 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm44656-201ENSMUST00000208428 490 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm9535-201ENSMUST00000218499 768 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smarcc1P97496 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.3□□□□□ -1.08
Smarcc1P97496 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smarcc1P97496 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Smarcc1P97496 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.29□□□□□ -1.08
Smarcc1P97496 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Smarcc1P97496 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.29□□□□□ -1.08
Smarcc1P97496 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smarcc1P97496 Gm12754-201ENSMUST00000121908 454 ntBASIC8.29□□□□□ -1.08
Smarcc1P97496 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms