Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdh11P55288 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Cdh11P55288 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdh11P55288 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Snord88a-201ENSMUST00000116723 90 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm15349-201ENSMUST00000121154 204 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm23756-201ENSMUST00000157582 114 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm24176-201ENSMUST00000158928 121 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdh11P55288 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm24369-201ENSMUST00000175387 96 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm19739-201ENSMUST00000195941 153 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm9367-201ENSMUST00000205703 546 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm7252-201ENSMUST00000223284 456 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm25587-201ENSMUST00000082498 166 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Mir425-201ENSMUST00000083645 85 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm29486-201ENSMUST00000088648 372 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm13141-201ENSMUST00000117417 456 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm11976-201ENSMUST00000119236 295 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm11553-201ENSMUST00000120682 240 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm14613-201ENSMUST00000122239 752 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm17711-201ENSMUST00000172028 237 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdh11P55288 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdh11P55288 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm27970-201ENSMUST00000184854 407 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm27804-201ENSMUST00000185135 119 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdh11P55288 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Trbv27-201ENSMUST00000193711 277 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdh11P55288 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm43089-201ENSMUST00000199162 275 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdh11P55288 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm8607-201ENSMUST00000221864 431 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.85□□□□□ -1.47
Cdh11P55288 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Cdh11P55288 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Cdh11P55288 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdh11P55288 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms