Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm26570-201ENSMUST00000180672 342 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Mir6409-201ENSMUST00000184957 92 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm28639-201ENSMUST00000191519 481 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm19764-201ENSMUST00000203630 649 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.3□□□□□ -1.08
Rfx1P48377 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rfx1P48377 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rfx1P48377 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Rfx1P48377 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rfx1P48377 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rfx1P48377 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.3□□□□□ -1.08
Rfx1P48377 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm4073-201ENSMUST00000176792 3500 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Igkv11-106-201ENSMUST00000103331 346 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm22671-201ENSMUST00000104420 134 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm12636-201ENSMUST00000117395 624 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Defa-ps1-201ENSMUST00000119062 282 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Gm14712-201ENSMUST00000120195 772 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Gm14979-201ENSMUST00000121561 1035 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Defa-ps6-201ENSMUST00000122172 282 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm23891-201ENSMUST00000158114 138 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm37581-201ENSMUST00000192371 988 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm44773-201ENSMUST00000207374 557 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Gm18877-201ENSMUST00000207706 539 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Gm4548-201ENSMUST00000208487 509 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 AC117797.2-201ENSMUST00000224419 531 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 AC137902.2-201ENSMUST00000227989 576 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rfx1P48377 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Rfx1P48377 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC8.29□□□□□ -1.08
Rfx1P48377 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms