Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdx2P43241 Gm23011-202ENSMUST00000197855 275 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm42886-201ENSMUST00000199214 466 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm2996-201ENSMUST00000211398 537 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdx2P43241 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cdx2P43241 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.15□□□□□ -1.42
Cdx2P43241 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Cdx2P43241 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.15□□□□□ -1.43
Cdx2P43241 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.15□□□□□ -1.43
Cdx2P43241 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.15□□□□□ -1.43
Cdx2P43241 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.15□□□□□ -1.43
Cdx2P43241 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdx2P43241 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdx2P43241 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Cdx2P43241 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Gm22372-201ENSMUST00000104589 136 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm13428-201ENSMUST00000117540 365 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm14796-201ENSMUST00000121216 959 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.14□□□□□ -1.43
Cdx2P43241 Gm22599-201ENSMUST00000157597 132 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm23995-201ENSMUST00000158060 129 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm2539-203ENSMUST00000181352 746 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm8869-201ENSMUST00000195222 947 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm45026-201ENSMUST00000205292 833 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm9292-201ENSMUST00000222008 710 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Cdx2P43241 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Cdx2P43241 Snora44-201ENSMUST00000082670 129 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.14□□□□□ -1.43
Cdx2P43241 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.14□□□□□ -1.43
Cdx2P43241 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cdx2P43241 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdx2P43241 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm7146-201ENSMUST00000116079 739 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm11976-201ENSMUST00000119236 295 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm13489-201ENSMUST00000121234 971 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm7931-201ENSMUST00000121537 271 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm9597-201ENSMUST00000171913 602 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm27849-201ENSMUST00000183673 125 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm8524-201ENSMUST00000186232 379 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm37187-201ENSMUST00000193425 341 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 Gm18290-201ENSMUST00000202900 844 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.13□□□□□ -1.43
Cdx2P43241 Gm45850-201ENSMUST00000212536 338 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.13□□□□□ -1.43
Cdx2P43241 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx2P43241 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms