Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir199b-201ENSMUST00000175066 110 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lire1P11260 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Gm23139-201ENSMUST00000179454 132 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Mir6357-201ENSMUST00000184246 104 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm28967-201ENSMUST00000187351 281 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm29161-201ENSMUST00000188250 699 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm37526-201ENSMUST00000194640 619 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lire1P11260 Gm44003-201ENSMUST00000203024 490 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm43926-201ENSMUST00000203978 430 ntBASIC6.39□□□□□ -1.39
Lire1P11260 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Lire1P11260 Gm18469-201ENSMUST00000208850 439 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.39□□□□□ -1.39
Lire1P11260 Gm5080-201ENSMUST00000220341 743 ntBASIC6.39□□□□□ -1.39
Lire1P11260 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.39□□□□□ -1.39
Lire1P11260 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lire1P11260 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Lire1P11260 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lire1P11260 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lire1P11260 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.38□□□□□ -1.39
Lire1P11260 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Lire1P11260 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Lire1P11260 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.38□□□□□ -1.39
Lire1P11260 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Lire1P11260 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm22438-201ENSMUST00000104049 132 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Gm11903-201ENSMUST00000118958 727 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Gm16027-201ENSMUST00000161618 758 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Gm3585-201ENSMUST00000173438 875 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm18728-201ENSMUST00000186155 753 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm28416-201ENSMUST00000188334 292 ntBASIC6.38□□□□□ -1.39
Lire1P11260 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm17965-201ENSMUST00000193904 517 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm37720-201ENSMUST00000195497 1241 ntBASIC6.38□□□□□ -1.39
Lire1P11260 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm3549-201ENSMUST00000203873 794 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.38□□□□□ -1.39
Lire1P11260 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm18789-201ENSMUST00000216115 550 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.38□□□□□ -1.39
Lire1P11260 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.38□□□□□ -1.39
Lire1P11260 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Lire1P11260 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lire1P11260 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lire1P11260 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.38□□□□□ -1.39
Lire1P11260 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Lire1P11260 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Lire1P11260 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.38□□□□□ -1.39
Lire1P11260 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lire1P11260 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms