Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm13469-201ENSMUST00000118231 350 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm7212-201ENSMUST00000120817 348 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm14489-201ENSMUST00000120868 901 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm15502-201ENSMUST00000121449 208 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm23894-201ENSMUST00000158107 313 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm23343-201ENSMUST00000158964 143 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm7804-202ENSMUST00000194187 854 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm37883-201ENSMUST00000194970 725 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm18600-201ENSMUST00000207205 505 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm9535-201ENSMUST00000218499 768 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm18618-201ENSMUST00000222211 473 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm29486-201ENSMUST00000088648 372 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
H2afb2S4R1M3 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm26340-201ENSMUST00000102365 99 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm11799-201ENSMUST00000116110 460 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm8312-201ENSMUST00000119380 618 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm14863-201ENSMUST00000119648 307 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm22548-201ENSMUST00000174899 78 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm43436-201ENSMUST00000199308 147 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm15500-201ENSMUST00000071523 894 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms