Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Lima1Q9ERG0 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm25593-201ENSMUST00000102272 96 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm13739-201ENSMUST00000118020 530 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm6987-201ENSMUST00000119319 428 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm14353-201ENSMUST00000122200 869 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm12778-201ENSMUST00000122341 333 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm9064-201ENSMUST00000163579 566 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm22990-201ENSMUST00000175427 89 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm20690-201ENSMUST00000177341 315 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm5283-201ENSMUST00000177874 334 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Mir6987-201ENSMUST00000184789 73 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm18849-201ENSMUST00000189861 560 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm37620-201ENSMUST00000192910 501 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm2754-201ENSMUST00000223383 589 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lima1Q9ERG0 Robo2-210ENSMUST00000226478 8059 ntBASIC6.21□□□□□ -1.41
Lima1Q9ERG0 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Lima1Q9ERG0 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.21□□□□□ -1.41
Lima1Q9ERG0 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
Lima1Q9ERG0 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Lima1Q9ERG0 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm13444-201ENSMUST00000119445 522 ntBASIC6.21□□□□□ -1.42
Lima1Q9ERG0 Gm26167-201ENSMUST00000158423 253 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms