Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm5260-201ENSMUST00000186157 949 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm43033-201ENSMUST00000199682 425 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm18838-201ENSMUST00000204855 886 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm18789-201ENSMUST00000216115 550 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm10205-201ENSMUST00000087431 234 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdc40Q9DC48 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm9839-201ENSMUST00000195252 1437 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm2986-201ENSMUST00000121603 382 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm14212-201ENSMUST00000122023 826 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm10177-201ENSMUST00000160052 444 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm23968-201ENSMUST00000175047 125 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm43576-201ENSMUST00000197937 871 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm7663-201ENSMUST00000201151 1240 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm44911-201ENSMUST00000208436 1062 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm7780-201ENSMUST00000214787 406 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 AL929555.1-201ENSMUST00000215283 509 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm4556-201ENSMUST00000217808 355 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 AC117769.2-201ENSMUST00000224612 469 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm5341-201ENSMUST00000058881 489 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm28392-201ENSMUST00000077630 393 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdc40Q9DC48 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm45061-201ENSMUST00000204395 2095 ntBASIC6□□□□□ -1.45
Cdc40Q9DC48 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Cdc40Q9DC48 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdc40Q9DC48 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdc40Q9DC48 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms